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I use QT to make PC apps to support my personnal embedded development, and they move to CMAKE, hostnesly i don't like CMAKE, but with QT they handle it like a project file. and create the tree in IDE from it.. Also it search only in file included in the project. 

Did you considered using Cmakelist.txt as project, or maybe a converter to Import/Export?

I will like to move the big eclipse project with cmakelist.txt to Embitz.

Thank you.
have a nice day! Smile